Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase 2 family protein | D1781_07710 | Not Available | Positive | 1532806 - 1533699 | 30824.3 |
| tyrosine-protein phosphatase | D1781_07715 | Not Available | Negative | 1533703 - 1534431 | 25654.3 |
| hypothetical protein | D1781_07720 | Not Available | Negative | 1534424 - 1535236 | 27038.6 |
| atp-binding cassette domain-containing protein | D1781_07725 | Not Available | Negative | 1535233 - 1536165 | 32102.7 |
| transcriptional repressor lexa | D1781_07730 | Not Available | Negative | 1536282 - 1537016 | 26292.8 |
| lysm peptidoglycan-binding domain-containing protein | D1781_07735 | Not Available | Positive | 1537159 - 1537692 | 18279.2 |
| histidinol-phosphate transaminase | D1781_07740 | Not Available | Positive | 1537733 - 1538821 | 39275.9 |
| imidazoleglycerol-phosphate dehydratase hisb | D1781_07745 | Not Available | Positive | 1538818 - 1539417 | 21010.9 |
| imidazole glycerol phosphate synthase subunit hish | D1781_07750 | Not Available | Positive | 1539414 - 1540049 | 22521.0 |
| bifunctional 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase/phosphoribosylanthranilate isomerase pria | D1781_07755 | Not Available | Positive | 1540052 - 1540798 | 25872.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
