Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3046 domain-containing protein | D1781_07660 | Not Available | Positive | 1522483 - 1522704 | 8026.48 |
| recombinase reca | D1781_07665 | Not Available | Positive | 1523046 - 1524140 | 38771.8 |
| regulatory protein recx | D1781_07670 | Not Available | Positive | 1524144 - 1524881 | 26610.3 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | D1781_07675 | Not Available | Positive | 1524987 - 1526492 | 54236.4 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | D1781_07680 | Not Available | Positive | 1526492 - 1527418 | 32843.5 |
| hypothetical protein | D1781_07685 | Not Available | Positive | 1527510 - 1528649 | 36101.4 |
| diaminopimelate epimerase | D1781_07690 | Not Available | Positive | 1528659 - 1529519 | 29474.9 |
| methyltransferase domain-containing protein | D1781_07695 | Not Available | Negative | 1529551 - 1530153 | 21478.8 |
| gtpase hflx | D1781_07700 | Not Available | Positive | 1530162 - 1531637 | 53919.4 |
| helix-turn-helix domain-containing protein | D1781_07705 | Not Available | Positive | 1531859 - 1532809 | 34010.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
