Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr01777 family protein | D1781_07605 | Not Available | Negative | 1511769 - 1512779 | 35899.5 |
| thioredoxin | D1781_07610 | Not Available | Negative | 1512806 - 1513228 | 14718.8 |
| fad-dependent thymidylate synthase | D1781_07615 | Not Available | Positive | 1513284 - 1514012 | 27403.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | D1781_07620 | Not Available | Positive | 1514083 - 1515051 | 33834.5 |
| ribonuclease j | D1781_07625 | Not Available | Positive | 1515051 - 1516727 | 60545.2 |
| arsr family transcriptional regulator | D1781_07630 | Not Available | Positive | 1516926 - 1517282 | 13514.2 |
| dna translocase ftsk | D1781_07640 | Not Available | Positive | 1517874 - 1520750 | 101073.0 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | D1781_07645 | Not Available | Positive | 1520871 - 1521476 | 21206.5 |
| cina family protein | D1781_07650 | Not Available | Positive | 1521473 - 1521958 | 16158.5 |
| xre family transcriptional regulator | D1781_07655 | Not Available | Positive | 1522128 - 1522469 | 12447.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
