Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s15 | D1781_07405 | Not Available | Positive | 1471564 - 1471833 | 10309.6 |
| transferase | D1781_07410 | Not Available | Negative | 1471926 - 1472342 | 14377.0 |
| hypothetical protein | D1781_07415 | Not Available | Positive | 1472442 - 1472861 | 15628.8 |
| aldo/keto reductase | D1781_07420 | Not Available | Positive | 1472914 - 1473885 | 35339.6 |
| hypothetical protein | D1781_07425 | Not Available | Positive | 1473913 - 1474146 | 8048.92 |
| siderophore-interacting protein | D1781_07430 | Not Available | Negative | 1474254 - 1475027 | 27628.4 |
| llm class flavin-dependent oxidoreductase | D1781_07435 | Not Available | Positive | 1475081 - 1476145 | 37311.6 |
| helicase | D1781_07440 | Not Available | Positive | 1476249 - 1479536 | 119993.0 |
| mfs transporter | D1781_07445 | Not Available | Negative | 1479544 - 1480821 | 44646.8 |
| tetr/acrr family transcriptional regulator | D1781_07450 | Not Available | Positive | 1480855 - 1481538 | 23744.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
