Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease prsw | D1781_07355 | Not Available | Positive | 1458913 - 1460061 | 40236.5 |
| duf1800 domain-containing protein | D1781_07360 | Not Available | Positive | 1460227 - 1461858 | 59652.4 |
| duf1501 domain-containing protein | D1781_07365 | Not Available | Positive | 1461877 - 1463262 | 48132.6 |
| m50 family peptidase | D1781_07370 | Not Available | Negative | 1463384 - 1464043 | 22540.3 |
| mfs transporter | D1781_07375 | Not Available | Negative | 1464091 - 1465416 | 44747.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | D1781_07380 | Not Available | Positive | 1465483 - 1465860 | 13172.7 |
| adenine phosphoribosyltransferase | D1781_07385 | Not Available | Positive | 1465922 - 1466446 | 17755.5 |
| duf4192 family protein | D1781_07390 | Not Available | Positive | 1466567 - 1467832 | 45501.3 |
| aaa family atpase | D1781_07395 | Not Available | Positive | 1467885 - 1470086 | 79369.6 |
| serine protease | D1781_07400 | Not Available | Negative | 1470160 - 1471344 | 39084.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
