Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_07305 | Not Available | Positive | 1448021 - 1448221 | 6807.08 |
| s9 family peptidase | D1781_07310 | Not Available | Negative | 1448385 - 1450496 | 77476.0 |
| hypothetical protein | D1781_07315 | Not Available | Negative | 1450508 - 1451830 | 45768.2 |
| hypothetical protein | D1781_07320 | Not Available | Negative | 1451881 - 1452327 | 16345.5 |
| atp-dependent dna ligase | D1781_07325 | Not Available | Negative | 1452482 - 1454965 | 89918.0 |
| ku protein | D1781_07330 | Not Available | Positive | 1455092 - 1455934 | 31491.1 |
| hypothetical protein | D1781_07335 | Not Available | Positive | 1456023 - 1456526 | 16874.2 |
| hypothetical protein | D1781_07340 | Not Available | Positive | 1456580 - 1456828 | 7687.4 |
| sodium:proton antiporter | D1781_07345 | Not Available | Negative | 1456875 - 1457411 | 19214.4 |
| fad-binding protein | D1781_07350 | Not Available | Positive | 1457469 - 1458863 | 47156.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
