Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphotransferase | D1781_07255 | Not Available | Positive | 1435559 - 1437097 | 57741.1 |
| phosphodiesterase | D1781_07260 | Not Available | Negative | 1437436 - 1438431 | 35740.0 |
| hypothetical protein | D1781_07265 | Not Available | Negative | 1438652 - 1439521 | 28601.1 |
| pseudouridine-5'-phosphate glycosidase | D1781_07270 | Not Available | Negative | 1439518 - 1440441 | 32024.1 |
| fad-dependent oxidoreductase | D1781_07275 | Not Available | Positive | 1440480 - 1441979 | 51609.6 |
| dead/deah box helicase | D1781_07280 | Not Available | Positive | 1442222 - 1444246 | 73805.5 |
| hypothetical protein | D1781_07285 | Not Available | Positive | 1444323 - 1444577 | 8423.37 |
| membrane protein insertase yidc | D1781_07290 | Not Available | Positive | 1444687 - 1445418 | 24386.5 |
| hypothetical protein | D1781_07295 | Not Available | Negative | 1445525 - 1446511 | 34362.9 |
| aldehyde dehydrogenase | D1781_07300 | Not Available | Negative | 1446677 - 1447810 | 40604.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
