Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | D1781_07155 | Not Available | Positive | 1414851 - 1415984 | 40010.3 |
| duf861 domain-containing protein | D1781_07160 | Not Available | Negative | 1416039 - 1416371 | 11338.4 |
| proline--trna ligase | D1781_07165 | Not Available | Positive | 1416550 - 1418313 | 63360.0 |
| hypothetical protein | D1781_07170 | Not Available | Positive | 1418316 - 1418537 | 6760.11 |
| smc family atpase | D1781_07175 | Not Available | Negative | 1418586 - 1421525 | 102250.0 |
| exonuclease sbccd subunit d | D1781_07180 | Not Available | Negative | 1421522 - 1422676 | 40616.2 |
| hypothetical protein | D1781_07185 | Not Available | Negative | 1422716 - 1423024 | 11451.6 |
| transcription termination/antitermination protein nusa | D1781_07190 | Not Available | Positive | 1423107 - 1424105 | 35817.8 |
| translation initiation factor if-2 | D1781_07195 | Not Available | Positive | 1424389 - 1427247 | 99413.6 |
| 30s ribosome-binding factor rbfa | D1781_07200 | Not Available | Positive | 1427370 - 1427804 | 15616.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
