Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-aminobutyraldehyde dehydrogenase | D1781_07105 | Not Available | Positive | 1402870 - 1404303 | 51075.9 |
| fha domain-containing protein | D1781_07110 | Not Available | Positive | 1404374 - 1405357 | 34534.9 |
| serine/threonine-protein phosphatase | D1781_07115 | Not Available | Positive | 1405402 - 1406193 | 27326.1 |
| hypothetical protein | D1781_07120 | Not Available | Positive | 1406265 - 1408781 | 85635.0 |
| 4-aminobutyrate--2-oxoglutarate transaminase | D1781_07125 | Not Available | Negative | 1408785 - 1410146 | 47114.4 |
| peptidylprolyl isomerase | D1781_07130 | Not Available | Positive | 1410134 - 1411231 | 36804.7 |
| hypothetical protein | D1781_07135 | Not Available | Positive | 1411343 - 1411669 | 11870.9 |
| osmc family peroxiredoxin | D1781_07140 | Not Available | Positive | 1411696 - 1412160 | 16604.3 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | D1781_07145 | Not Available | Positive | 1412157 - 1413269 | 38447.9 |
| peptidase | D1781_07150 | Not Available | Positive | 1413330 - 1414742 | 49251.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
