Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | D1781_07055 | Not Available | Positive | 1392982 - 1394565 | 54748.3 |
| abc transporter permease | D1781_07060 | Not Available | Positive | 1394543 - 1395643 | 38836.0 |
| abc transporter permease | D1781_07065 | Not Available | Positive | 1395640 - 1396515 | 30316.8 |
| abc transporter atp-binding protein | D1781_07070 | Not Available | Positive | 1396344 - 1397324 | 35052.8 |
| abc transporter atp-binding protein | D1781_07075 | Not Available | Positive | 1397321 - 1398100 | 27455.4 |
| dna-3-methyladenine glycosylase i | D1781_07080 | Not Available | Negative | 1398125 - 1398712 | 21051.8 |
| tryptophan-rich sensory protein | D1781_07085 | Not Available | Negative | 1398849 - 1399391 | 19285.0 |
| fad-dependent oxidoreductase | D1781_07090 | Not Available | Negative | 1399445 - 1400761 | 46301.2 |
| aspartate aminotransferase family protein | D1781_07095 | Not Available | Negative | 1400797 - 1402209 | 51448.0 |
| lrp/asnc family transcriptional regulator | D1781_07100 | Not Available | Negative | 1402273 - 1402740 | 17265.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
