Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | D1781_06955 | Not Available | Positive | 1372507 - 1373916 | 49044.2 |
| homoserine dehydrogenase | D1781_06960 | Not Available | Positive | 1373925 - 1375220 | 44151.8 |
| threonine synthase | D1781_06965 | Not Available | Positive | 1375233 - 1376336 | 38096.1 |
| homoserine kinase | D1781_06970 | Not Available | Positive | 1376333 - 1377283 | 32597.1 |
| transcription termination factor rho | D1781_06975 | Not Available | Positive | 1377503 - 1379581 | 74068.6 |
| peptide chain release factor 1 | D1781_06980 | Not Available | Positive | 1379578 - 1380675 | 40246.8 |
| peptide chain release factor n(5)-glutamine methyltransferase | D1781_06985 | Not Available | Positive | 1380677 - 1381549 | 30709.9 |
| threonylcarbamoyl-amp synthase | D1781_06990 | Not Available | Positive | 1381611 - 1382345 | 25262.7 |
| undecaprenyl/decaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | D1781_06995 | Not Available | Positive | 1382393 - 1383565 | 42034.4 |
| hypothetical protein | D1781_07000 | Not Available | Positive | 1383562 - 1383984 | 13873.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
