Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | D1781_06905 | Not Available | Negative | 1363868 - 1364461 | 22382.4 |
| lysr family transcriptional regulator | D1781_06910 | Not Available | Negative | 1364561 - 1365478 | 32886.5 |
| fad-dependent monooxygenase | D1781_06915 | Not Available | Positive | 1365528 - 1366670 | 40930.7 |
| nad-dependent epimerase/dehydratase family protein | D1781_06920 | Not Available | Positive | 1366937 - 1367806 | 30323.0 |
| hypothetical protein | D1781_06925 | Not Available | Positive | 1367803 - 1368036 | 8277.18 |
| Trna-arg | Not Available | Not Available | Positive | 1368058 - 1368129 | Not Available |
| nadp oxidoreductase | D1781_06935 | Not Available | Negative | 1368247 - 1368897 | 22539.3 |
| hypothetical protein | D1781_06940 | Not Available | Negative | 1368992 - 1369681 | 23136.4 |
| arginine--trna ligase | D1781_06945 | Not Available | Positive | 1369814 - 1371487 | 60558.7 |
| duf2993 domain-containing protein | D1781_06950 | Not Available | Positive | 1371484 - 1372302 | 28219.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
