Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_06800 | Not Available | Negative | 1348313 - 1348663 | 11592.6 |
| hypothetical protein | D1781_06805 | Not Available | Negative | 1348765 - 1350339 | 55710.6 |
| padr family transcriptional regulator | D1781_06810 | Not Available | Negative | 1350336 - 1350674 | 12194.4 |
| ld-carboxypeptidase | D1781_06815 | Not Available | Positive | 1350673 - 1351776 | 40185.8 |
| hypothetical protein | D1781_06820 | Not Available | Negative | 1351789 - 1352337 | 20362.5 |
| hypothetical protein | D1781_06825 | Not Available | Negative | 1352386 - 1352745 | 12932.2 |
| diadenosine tetraphosphate hydrolase | D1781_06830 | Not Available | Negative | 1352922 - 1353404 | 17937.3 |
| tyrosine-protein phosphatase | D1781_06835 | Not Available | Positive | 1353461 - 1354168 | 24725.5 |
| hypothetical protein | D1781_06840 | Not Available | Positive | 1354223 - 1354504 | 9993.11 |
| tetr/acrr family transcriptional regulator | D1781_06845 | Not Available | Negative | 1354595 - 1355122 | 18962.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
