Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | D1781_06550 | Not Available | Negative | 1304557 - 1305387 | 29059.5 |
| nad(p)/fad-dependent oxidoreductase | D1781_06555 | Not Available | Negative | 1305414 - 1306844 | 49538.5 |
| arginase family protein | D1781_06560 | Not Available | Negative | 1306932 - 1307786 | 28521.8 |
| hypothetical protein | D1781_06565 | Not Available | Negative | 1307807 - 1308154 | 12670.3 |
| alpha/beta hydrolase | D1781_06570 | Not Available | Positive | 1308256 - 1309029 | 26279.2 |
| hypothetical protein | D1781_06575 | Not Available | Positive | 1309026 - 1309778 | 25376.9 |
| hypothetical protein | D1781_06580 | Not Available | Positive | 1309788 - 1309997 | 7097.94 |
| hypothetical protein | D1781_06585 | Not Available | Negative | 1310014 - 1310361 | 12406.4 |
| peptide-methionine (r)-s-oxide reductase | D1781_06590 | Not Available | Positive | 1310483 - 1310980 | 18101.7 |
| peptide-methionine (s)-s-oxide reductase | D1781_06595 | Not Available | Positive | 1310983 - 1311498 | 19391.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
