Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | D1781_06350 | Not Available | Positive | 1260905 - 1261456 | 18925.5 |
| mfs transporter | D1781_06355 | Not Available | Positive | 1261467 - 1262930 | 49622.4 |
| glutathione-dependent formaldehyde dehydrogenase | D1781_06360 | Not Available | Negative | 1262997 - 1264172 | 41970.5 |
| methylated-dna--[protein]-cysteine s-methyltransferase | D1781_06365 | Not Available | Negative | 1264243 - 1264881 | 22484.8 |
| sigma-70 family rna polymerase sigma factor | D1781_06370 | Not Available | Negative | 1264878 - 1265342 | 16878.2 |
| histidinol phosphatase | D1781_06375 | Not Available | Negative | 1265349 - 1266155 | 28625.6 |
| ribosome small subunit-dependent gtpase a | D1781_06380 | Not Available | Negative | 1266259 - 1267338 | 38317.3 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | D1781_06385 | Not Available | Negative | 1267335 - 1268645 | 45136.1 |
| sigma-70 family rna polymerase sigma factor | D1781_06390 | Not Available | Positive | 1268895 - 1269608 | 26489.8 |
| alpha-ketoglutarate decarboxylase | D1781_06395 | Not Available | Positive | 1269614 - 1269853 | 9065.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
