Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_06300 | Not Available | Positive | 1252519 - 1252968 | 15223.6 |
| hypothetical protein | D1781_06305 | Not Available | Positive | 1253001 - 1253405 | 13692.7 |
| mfs transporter | D1781_06310 | Not Available | Negative | 1253480 - 1254751 | 42522.3 |
| peptide chain release factor 2 | D1781_06315 | Not Available | Positive | 1254807 - 1255925 | 40759.9 |
| adenosine deaminase | D1781_06320 | Not Available | Positive | 1255993 - 1257051 | 38051.1 |
| cell division atp-binding protein ftse | D1781_06325 | Not Available | Positive | 1257154 - 1258485 | 47233.2 |
| abc transporter permease | D1781_06330 | Not Available | Positive | 1258482 - 1259396 | 32635.1 |
| ssra-binding protein smpb | D1781_06335 | Not Available | Positive | 1259457 - 1259933 | 18174.6 |
| gnat family n-acetyltransferase | D1781_06340 | Not Available | Positive | 1259999 - 1260388 | 13711.5 |
| Tmrna,resume consensus sequence (at 87): aataggtgccagtaagtc | Not Available | Not Available | Positive | 1260491 - 1260861 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
