Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | D1781_06250 | Not Available | Positive | 1246061 - 1246648 | 20394.0 |
| deda family protein | D1781_06255 | Not Available | Negative | 1246669 - 1247352 | 24339.8 |
| Trna-leu | Not Available | Not Available | Positive | 1247378 - 1247460 | Not Available |
| cpaf family protein | D1781_06265 | Not Available | Positive | 1247581 - 1248810 | 43227.4 |
| type ii secretion system protein f | D1781_06270 | Not Available | Positive | 1248807 - 1249670 | 30538.7 |
| type ii secretion system f family protein | D1781_06275 | Not Available | Positive | 1249667 - 1250599 | 32245.0 |
| hypothetical protein | D1781_06280 | Not Available | Positive | 1250961 - 1251395 | 15676.8 |
| gnat family n-acetyltransferase | D1781_06285 | Not Available | Negative | 1251400 - 1251876 | 17043.2 |
| hypothetical protein | D1781_06290 | Not Available | Positive | 1251976 - 1252164 | 6520.02 |
| pilus assembly protein | D1781_06295 | Not Available | Positive | 1252161 - 1252544 | 12801.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
