Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_06150 | Not Available | Negative | 1223967 - 1224740 | 26813.2 |
| hypothetical protein | D1781_06155 | Not Available | Negative | 1224807 - 1226147 | 47689.6 |
| pdz domain-containing protein | D1781_06160 | Not Available | Positive | 1226229 - 1227287 | 35513.4 |
| upf0182 family protein | D1781_06165 | Not Available | Positive | 1227284 - 1230256 | 105988.0 |
| Trna-met | Not Available | Not Available | Positive | 1230306 - 1230382 | Not Available |
| sdr family oxidoreductase | D1781_06175 | Not Available | Negative | 1230451 - 1231140 | 23137.4 |
| carbon-nitrogen hydrolase family protein | D1781_06180 | Not Available | Positive | 1231202 - 1231993 | 27971.5 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | D1781_06185 | Not Available | Negative | 1232013 - 1233215 | 42063.3 |
| pdz domain-containing protein | D1781_06190 | Not Available | Positive | 1233319 - 1234701 | 44981.1 |
| duf3459 domain-containing protein | D1781_06195 | Not Available | Positive | 1234931 - 1236817 | 69333.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
