Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m6 family metalloprotease domain-containing protein | D1781_06100 | Not Available | Negative | 1208193 - 1210544 | 84666.4 |
| dead/deah box helicase | D1781_06105 | Not Available | Negative | 1210692 - 1212182 | 53115.0 |
| hypothetical protein | D1781_06110 | Not Available | Positive | 1212353 - 1213072 | 25701.1 |
| hypothetical protein | D1781_06115 | Not Available | Negative | 1213298 - 1213579 | 9596.02 |
| duf3107 domain-containing protein | D1781_06120 | Not Available | Negative | 1213581 - 1213805 | 8012.45 |
| atp-dependent helicase | D1781_06125 | Not Available | Positive | 1213851 - 1217051 | 111944.0 |
| atp-dependent helicase | D1781_06130 | Not Available | Positive | 1217074 - 1220241 | 113505.0 |
| macrolide 2'-phosphotransferase | D1781_06135 | Not Available | Negative | 1220175 - 1221290 | 38457.1 |
| nad(+) diphosphatase | D1781_06140 | Not Available | Positive | 1221369 - 1222304 | 33840.8 |
| atp-dependent helicase | D1781_06145 | Not Available | Positive | 1222298 - 1224049 | 62355.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
