Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | D1781_06045 | Not Available | Negative | 1197586 - 1198488 | 31799.4 |
| duf59 domain-containing protein | D1781_06050 | Not Available | Negative | 1198823 - 1199926 | 37402.4 |
| duf1003 domain-containing protein | D1781_06055 | Not Available | Negative | 1199923 - 1200507 | 21967.1 |
| magnesium transporter | D1781_06060 | Not Available | Negative | 1200491 - 1201843 | 49057.4 |
| aminopeptidase p family protein | D1781_06070 | Not Available | Negative | 1202611 - 1204023 | 51238.1 |
| aminoglycoside phosphotransferase family protein | D1781_06075 | Not Available | Positive | 1204022 - 1204882 | 31461.0 |
| hypothetical protein | D1781_06080 | Not Available | Negative | 1204887 - 1205432 | 19088.6 |
| endonuclease/exonuclease/phosphatase family protein | D1781_06085 | Not Available | Negative | 1205497 - 1207167 | 58337.6 |
| php domain-containing protein | D1781_06090 | Not Available | Positive | 1206595 - 1207446 | 29267.5 |
| n-acetyltransferase | D1781_06095 | Not Available | Negative | 1207453 - 1208115 | 24776.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
