Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_05995 | Not Available | Positive | 1189606 - 1190070 | 15426.8 |
| ferredoxin family protein | D1781_06000 | Not Available | Positive | 1190067 - 1190384 | 11547.6 |
| citrate synthase | D1781_06005 | Not Available | Positive | 1190423 - 1191709 | 47117.1 |
| hypothetical protein | D1781_06010 | Not Available | Positive | 1191911 - 1192831 | 33767.4 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | D1781_06015 | Not Available | Negative | 1192917 - 1193852 | 32607.1 |
| succinyl-diaminopimelate desuccinylase | D1781_06020 | Not Available | Positive | 1193913 - 1194989 | 38186.4 |
| hypothetical protein | D1781_06025 | Not Available | Positive | 1194986 - 1196218 | 43678.1 |
| duf3117 domain-containing protein | D1781_06030 | Not Available | Positive | 1196304 - 1196471 | 5689.98 |
| methyltransferase domain-containing protein | D1781_06035 | Not Available | Negative | 1196515 - 1197159 | 22641.9 |
| hypothetical protein | D1781_06040 | Not Available | Positive | 1197211 - 1197582 | 14047.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
