Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | D1781_05945 | Not Available | Positive | 1176671 - 1178434 | 62016.5 |
| abc transporter permease | D1781_05950 | Not Available | Positive | 1178528 - 1179532 | 36017.9 |
| abc transporter atp-binding protein | D1781_05955 | Not Available | Positive | 1179556 - 1180644 | 40281.6 |
| atp-binding cassette domain-containing protein | D1781_05960 | Not Available | Positive | 1180661 - 1181770 | 40393.5 |
| acetamidase | D1781_05965 | Not Available | Positive | 1181767 - 1182690 | 32844.9 |
| n-acetyltransferase | D1781_05970 | Not Available | Negative | 1182707 - 1183213 | 18556.0 |
| translational gtpase typa | D1781_05975 | Not Available | Positive | 1183373 - 1185289 | 69358.5 |
| deferrochelatase/peroxidase efeb | D1781_05980 | Not Available | Negative | 1185390 - 1186697 | 46331.4 |
| efem/efeo family lipoprotein | D1781_05985 | Not Available | Negative | 1186698 - 1187948 | 43045.5 |
| ferrous iron transporter | D1781_05990 | Not Available | Negative | 1187935 - 1189494 | 52033.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
