Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| redox-regulated atpase ychf | D1781_05895 | Not Available | Positive | 1164722 - 1165792 | 37661.9 |
| l-serine ammonia-lyase | D1781_05900 | Not Available | Positive | 1165945 - 1167360 | 48212.7 |
| peptidase s16 | D1781_05905 | Not Available | Positive | 1167623 - 1168213 | 21604.8 |
| glycine cleavage system aminomethyltransferase gcvt | D1781_05910 | Not Available | Positive | 1168531 - 1169673 | 40425.2 |
| glycine cleavage system protein gcvh | D1781_05915 | Not Available | Positive | 1169676 - 1170050 | 12778.8 |
| glycine dehydrogenase (aminomethyl-transferring) | D1781_05920 | Not Available | Positive | 1170047 - 1173022 | 104517.0 |
| 2'-5' rna ligase family protein | D1781_05925 | Not Available | Negative | 1173101 - 1173676 | 20338.4 |
| gnat family n-acetyltransferase | D1781_05930 | Not Available | Negative | 1173657 - 1174676 | 35483.3 |
| cpbp family intramembrane metalloprotease | D1781_05935 | Not Available | Negative | 1174454 - 1175230 | 27419.0 |
| abc transporter permease | D1781_05940 | Not Available | Positive | 1175437 - 1176525 | 37977.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
