Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease vii large subunit | D1781_05845 | Not Available | Negative | 1154579 - 1155835 | 45475.3 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | D1781_05850 | Not Available | Positive | 1155859 - 1156911 | 37422.1 |
| hypothetical protein | D1781_05855 | Not Available | Positive | 1157025 - 1157291 | 9056.37 |
| class ii fructose-bisphosphate aldolase | D1781_05860 | Not Available | Negative | 1157298 - 1158326 | 36126.7 |
| class ii fructose-bisphosphatase | D1781_05865 | Not Available | Positive | 1158445 - 1159422 | 34255.3 |
| dna recombination protein rmuc | D1781_05870 | Not Available | Negative | 1159543 - 1160823 | 46106.8 |
| arsr family transcriptional regulator | D1781_05875 | Not Available | Positive | 1160822 - 1161499 | 25650.5 |
| mfs transporter | D1781_05880 | Not Available | Positive | 1161073 - 1162689 | 54829.9 |
| dna polymerase iii subunit epsilon | D1781_05885 | Not Available | Negative | 1162686 - 1163291 | 21499.5 |
| mate family efflux transporter | D1781_05890 | Not Available | Negative | 1163352 - 1164629 | 41055.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
