Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phoh family protein | D1781_05795 | Not Available | Positive | 1146009 - 1147286 | 45705.7 |
| hypothetical protein | D1781_05800 | Not Available | Positive | 1147584 - 1147904 | 10529.3 |
| prepilin peptidase | D1781_05805 | Not Available | Positive | 1147963 - 1148487 | 17690.8 |
| hypothetical protein | D1781_05810 | Not Available | Positive | 1148610 - 1149371 | 26271.4 |
| hypothetical protein | D1781_05815 | Not Available | Negative | 1149401 - 1150426 | 35906.2 |
| duf1727 domain-containing protein | D1781_05820 | Not Available | Negative | 1150180 - 1151499 | 46649.2 |
| class ii fumarate hydratase | D1781_05825 | Not Available | Negative | 1151654 - 1153054 | 48767.4 |
| carbonic anhydrase | D1781_05830 | Not Available | Negative | 1153092 - 1153703 | 20909.6 |
| duf4245 domain-containing protein | D1781_05835 | Not Available | Negative | 1153700 - 1154446 | 26338.3 |
| exodeoxyribonuclease vii small subunit | D1781_05840 | Not Available | Negative | 1154356 - 1154568 | 7548.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
