Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix domain-containing protein | D1781_05745 | Not Available | Negative | 1136927 - 1138096 | 42713.1 |
| ai-2e family transporter | D1781_05750 | Not Available | Positive | 1138208 - 1139410 | 41357.4 |
| threonine ammonia-lyase | D1781_05755 | Not Available | Positive | 1139454 - 1140689 | 42899.7 |
| transcription elongation factor grea | D1781_05760 | Not Available | Negative | 1140780 - 1141268 | 17105.0 |
| duf4307 domain-containing protein | D1781_05765 | Not Available | Negative | 1141390 - 1141794 | 13933.5 |
| hypothetical protein | D1781_05770 | Not Available | Positive | 1141860 - 1142081 | 7812.65 |
| hemolysin iii family protein | D1781_05775 | Not Available | Negative | 1142084 - 1142833 | 26879.2 |
| di-trans,poly-cis-decaprenylcistransferase | D1781_05780 | Not Available | Positive | 1142996 - 1143670 | 24536.1 |
| aminotransferase class v-fold plp-dependent enzyme | D1781_05785 | Not Available | Positive | 1143741 - 1144868 | 38725.2 |
| had family phosphatase | D1781_05790 | Not Available | Positive | 1144865 - 1145722 | 30032.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
