Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_05695 | Not Available | Negative | 1127748 - 1128458 | 24939.3 |
| nicotinamide riboside transporter pnuc | D1781_05700 | Not Available | Positive | 1128562 - 1129227 | 24408.9 |
| sdr family nad(p)-dependent oxidoreductase | D1781_05705 | Not Available | Negative | 1129308 - 1130015 | 23910.4 |
| d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase | D1781_05710 | Not Available | Negative | 1130096 - 1131454 | 46620.0 |
| sis domain-containing protein | D1781_05715 | Not Available | Negative | 1131451 - 1132059 | 20895.7 |
| glycosyltransferase family 1 protein | D1781_05720 | Not Available | Negative | 1132056 - 1133303 | 44281.0 |
| glycosyltransferase | D1781_05725 | Not Available | Negative | 1133300 - 1134328 | 37108.3 |
| glycosyltransferase family 9 protein | D1781_05730 | Not Available | Negative | 1134325 - 1135341 | 34332.6 |
| had-iiia family hydrolase | D1781_05735 | Not Available | Negative | 1135338 - 1135871 | 17505.8 |
| glycosyltransferase family 9 protein | D1781_05740 | Not Available | Positive | 1135956 - 1136900 | 31734.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
