Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2277 domain-containing protein | D1781_05590 | Not Available | Negative | 1108572 - 1108868 | 11119.3 |
| ycei family protein | D1781_05595 | Not Available | Negative | 1108937 - 1109653 | 24686.4 |
| 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit cofg | D1781_05600 | Not Available | Positive | 1109799 - 1112222 | 84729.9 |
| nad(p)/fad-dependent oxidoreductase | D1781_05605 | Not Available | Positive | 1112219 - 1113724 | 52669.4 |
| merr family transcriptional regulator | D1781_05610 | Not Available | Negative | 1113655 - 1114143 | 17451.8 |
| sdr family nad(p)-dependent oxidoreductase | D1781_05615 | Not Available | Positive | 1114274 - 1114996 | 25194.1 |
| mfs transporter | D1781_05620 | Not Available | Positive | 1115253 - 1116338 | 35822.0 |
| nadp oxidoreductase | D1781_05625 | Not Available | Positive | 1116335 - 1117018 | 23784.4 |
| hypothetical protein | D1781_05630 | Not Available | Negative | 1117034 - 1117636 | 21912.6 |
| hypothetical protein | D1781_05635 | Not Available | Negative | 1117810 - 1118382 | 20127.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
