Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | D1781_05540 | Not Available | Negative | 1101058 - 1101582 | 19263.7 |
| sensor histidine kinase | D1781_05545 | Not Available | Negative | 1101606 - 1103051 | 50353.7 |
| dna-binding response regulator | D1781_05550 | Not Available | Negative | 1103048 - 1103740 | 24815.0 |
| hypothetical protein | D1781_05555 | Not Available | Positive | 1103961 - 1104659 | 21460.7 |
| hypothetical protein | D1781_05560 | Not Available | Positive | 1104789 - 1105277 | 18223.3 |
| alpha-hydroxy-acid oxidizing enzyme | D1781_05565 | Not Available | Negative | 1105300 - 1106352 | 35925.0 |
| sdr family oxidoreductase | D1781_05570 | Not Available | Negative | 1106398 - 1107180 | 26704.7 |
| prc-barrel domain containing protein | D1781_05575 | Not Available | Negative | 1107224 - 1107586 | 13149.4 |
| n-acetyltransferase | D1781_05580 | Not Available | Positive | 1107617 - 1108234 | 22657.9 |
| transcription initiation protein | D1781_05585 | Not Available | Negative | 1108231 - 1108575 | 12228.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
