Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nmra family transcriptional regulator | D1781_05390 | Not Available | Negative | 1070042 - 1070908 | 30529.4 |
| hnh endonuclease | D1781_05395 | Not Available | Positive | 1070983 - 1072467 | 53497.9 |
| duf4062 domain-containing protein | D1781_05400 | Not Available | Negative | 1072535 - 1073869 | 49135.0 |
| sdr family oxidoreductase | D1781_05405 | Not Available | Negative | 1073966 - 1074697 | 25020.1 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | D1781_05410 | Not Available | Negative | 1074694 - 1076226 | 53236.9 |
| amidohydrolase | D1781_05415 | Not Available | Positive | 1076408 - 1077391 | 35554.7 |
| transcription-repair coupling factor | D1781_05420 | Not Available | Positive | 1077491 - 1081129 | 131779.0 |
| glyoxalase | D1781_05425 | Not Available | Positive | 1081245 - 1081625 | 12535.8 |
| arac family transcriptional regulator | D1781_05430 | Not Available | Positive | 1081657 - 1082127 | 16599.9 |
| dihydrofolate reductase | D1781_05435 | Not Available | Positive | 1082137 - 1082799 | 23763.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
