Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-methyl-5-thioribose-1-phosphate isomerase | D1781_05340 | Not Available | Positive | 1059210 - 1060184 | 32632.1 |
| ribulose 1,5-bisphosphate carboxylase large subunit | D1781_05345 | Not Available | Positive | 1060181 - 1061287 | 37728.5 |
| cupin domain-containing protein | D1781_05350 | Not Available | Negative | 1061316 - 1061972 | 24053.4 |
| 50s ribosomal protein l25/general stress protein ctc | D1781_05355 | Not Available | Positive | 1061971 - 1062579 | 20866.8 |
| aminoacyl-trna hydrolase | D1781_05360 | Not Available | Positive | 1062599 - 1063192 | 21116.2 |
| sdr family oxidoreductase | D1781_05365 | Not Available | Positive | 1063272 - 1064015 | 25843.7 |
| smp-30/gluconolactonase/lre family protein | D1781_05370 | Not Available | Positive | 1064012 - 1064974 | 35346.4 |
| rok family protein | D1781_05375 | Not Available | Positive | 1065011 - 1065946 | 31467.7 |
| alpha-mannosidase | D1781_05380 | Not Available | Positive | 1065943 - 1068567 | 95414.1 |
| hypothetical protein | D1781_05385 | Not Available | Negative | 1068589 - 1069875 | 44880.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
