Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy-metal-associated domain-containing protein | D1781_05290 | Not Available | Positive | 1049219 - 1049560 | 10756.4 |
| cation-transporting p-type atpase | D1781_05295 | Not Available | Positive | 1049564 - 1051678 | 71173.5 |
| hypothetical protein | D1781_05300 | Not Available | Positive | 1051692 - 1052537 | 29452.2 |
| hypothetical protein | D1781_05305 | Not Available | Positive | 1052530 - 1053354 | 26786.4 |
| sdr family oxidoreductase | D1781_05310 | Not Available | Positive | 1053377 - 1054156 | 26262.2 |
| nad(p)h-hydrate dehydratase | D1781_05315 | Not Available | Negative | 1054246 - 1055109 | 28337.8 |
| histidine phosphatase family protein | D1781_05320 | Not Available | Negative | 1055093 - 1055815 | 26236.9 |
| nadp-dependent phosphogluconate dehydrogenase | D1781_05325 | Not Available | Negative | 1055812 - 1057269 | 52218.4 |
| d-2-hydroxyacid dehydrogenase | D1781_05330 | Not Available | Positive | 1057284 - 1058414 | 41108.9 |
| gluconokinase | D1781_05335 | Not Available | Positive | 1058599 - 1059111 | 18366.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
