Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_05185 | Not Available | Positive | 1028189 - 1028764 | 20552.0 |
| coa transferase | D1781_05190 | Not Available | Positive | 1028929 - 1030269 | 46322.0 |
| acid phosphatase | D1781_05200 | Not Available | Positive | 1030962 - 1031792 | 29661.1 |
| hypothetical protein | D1781_05205 | Not Available | Positive | 1031878 - 1032201 | 10637.7 |
| glycogen debranching enzyme glgx | D1781_05210 | Not Available | Negative | 1032266 - 1034311 | 74942.9 |
| aldo/keto reductase | D1781_05215 | Not Available | Positive | 1034431 - 1035444 | 36028.7 |
| hypothetical protein | D1781_05220 | Not Available | Positive | 1035610 - 1037121 | 52244.3 |
| tetr/acrr family transcriptional regulator | D1781_05225 | Not Available | Negative | 1037135 - 1037713 | 20238.1 |
| nad-dependent epimerase/dehydratase family protein | D1781_05230 | Not Available | Positive | 1037826 - 1038713 | 30303.7 |
| rtcb family protein | D1781_05235 | Not Available | Positive | 1039042 - 1040214 | 42879.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
