Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2064 domain-containing protein | D1781_05135 | Not Available | Negative | 1017305 - 1017934 | 21788.0 |
| glycosyltransferase family 2 protein | D1781_05140 | Not Available | Negative | 1017957 - 1018622 | 23306.3 |
| nad-dependent epimerase/dehydratase family protein | D1781_05145 | Not Available | Negative | 1018634 - 1019692 | 36277.0 |
| 5'-methylthioadenosine phosphorylase | D1781_05150 | Not Available | Negative | 1019693 - 1020520 | 29255.1 |
| abc transporter atp-binding protein | D1781_05155 | Not Available | Positive | 1020595 - 1022367 | 64658.9 |
| apc family permease | D1781_05160 | Not Available | Positive | 1022633 - 1023991 | 47042.8 |
| hypothetical protein | D1781_05165 | Not Available | Negative | 1024008 - 1025486 | 50818.6 |
| Trna-gln | Not Available | Not Available | Positive | 1025567 - 1025638 | Not Available |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | D1781_05175 | Not Available | Positive | 1025671 - 1027140 | 50460.8 |
| ribose-phosphate diphosphokinase | D1781_05180 | Not Available | Positive | 1027137 - 1028114 | 35283.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
