Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | D1781_05085 | Not Available | Positive | 1007248 - 1008483 | 43013.1 |
| laci family transcriptional regulator | D1781_05090 | Not Available | Negative | 1008678 - 1009682 | 36246.2 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | D1781_05095 | Not Available | Positive | 1009783 - 1010643 | 29571.8 |
| duf2382 domain-containing protein | D1781_05100 | Not Available | Negative | 1010493 - 1011497 | 35567.7 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | D1781_05105 | Not Available | Positive | 1011610 - 1012533 | 31211.5 |
| hypothetical protein | D1781_05110 | Not Available | Negative | 1012597 - 1013301 | 23422.3 |
| duf2029 domain-containing protein | D1781_05115 | Not Available | Negative | 1013421 - 1014827 | 48823.6 |
| molybdopterin-binding protein | D1781_05120 | Not Available | Positive | 1014857 - 1016086 | 44264.4 |
| hypothetical protein | D1781_05125 | Not Available | Positive | 1016125 - 1016550 | 14477.5 |
| methyltransferase domain-containing protein | D1781_05130 | Not Available | Negative | 1016646 - 1017308 | 22942.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
