Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endo-1,4-beta-xylanase | D1781_05035 | Not Available | Positive | 992673 - 993773 | 40429.1 |
| dihydroxy-acid dehydratase | D1781_05040 | Not Available | Negative | 993996 - 995777 | 62434.3 |
| zn-dependent alcohol dehydrogenase | D1781_05045 | Not Available | Negative | 995789 - 996901 | 38130.2 |
| glycoside hydrolase family 5 protein | D1781_05050 | Not Available | Negative | 996898 - 998169 | 48392.4 |
| alpha-xylosidase | D1781_05055 | Not Available | Negative | 998332 - 1000659 | 85004.7 |
| sugar abc transporter substrate-binding protein | D1781_05060 | Not Available | Positive | 1000876 - 1001934 | 36036.5 |
| sugar abc transporter atp-binding protein | D1781_05065 | Not Available | Positive | 1002047 - 1002811 | 26919.7 |
| abc transporter permease | D1781_05070 | Not Available | Positive | 1002808 - 1004103 | 44251.4 |
| sugar abc transporter substrate-binding protein | D1781_05075 | Not Available | Positive | 1004492 - 1005604 | 39298.4 |
| atp-binding cassette domain-containing protein | D1781_05080 | Not Available | Positive | 1005710 - 1007251 | 55987.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
