Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | D1781_04985 | Not Available | Positive | 982873 - 983817 | 33396.2 |
| carbohydrate abc transporter permease | D1781_04990 | Not Available | Positive | 983810 - 984598 | 28848.4 |
| hypothetical protein | D1781_04995 | Not Available | Positive | 984697 - 985077 | 14326.1 |
| biopolymer transporter tol | D1781_05000 | Not Available | Positive | 985089 - 985970 | 31552.6 |
| nad-dependent epimerase/dehydratase family protein | D1781_05005 | Not Available | Positive | 986064 - 987122 | 38656.6 |
| aldo/keto reductase | D1781_05010 | Not Available | Positive | 987137 - 988087 | 32810.0 |
| sdr family oxidoreductase | D1781_05015 | Not Available | Positive | 988143 - 988925 | 28209.4 |
| hypothetical protein | D1781_05020 | Not Available | Negative | 989005 - 989937 | 34483.0 |
| aldehyde dehydrogenase (nadp(+)) | D1781_05025 | Not Available | Negative | 990127 - 991578 | 50362.9 |
| fumarylacetoacetate hydrolase | D1781_05030 | Not Available | Negative | 991575 - 992441 | 30720.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
