Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas edaphi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas edaphi strain DAC4
Accession NumberQXTF00000000.1
Gene Summary
Adenine Count
449324 bp
Thymine Count
448770 bp
Guanine Count
736304 bp
Cytosine Count
738754 bp
Genome Length
2373152 bp
Protein-coding Genes
2311 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad kinase | D3M59_00155 | Not Available | - | 27681 - 28508 | 30177.4 |
| eal domain-containing protein | D3M59_00160 | Not Available | + | 28582 - 29433 | 30418.8 |
| transcription-repair coupling factor | D3M59_00165 | Not Available | - | 29430 - 33020 | 131983.0 |
| succinate dehydrogenase assembly factor 2 | D3M59_00170 | Not Available | - | 32927 - 33187 | 9912.9 |
| atp-dependent dna helicase recg | D3M59_00175 | Not Available | + | 33290 - 35347 | 74432.5 |
| tyrosine--trna ligase | D3M59_00180 | Not Available | - | 35344 - 36567 | 44320.4 |
| hypothetical protein | D3M59_00185 | Not Available | + | 36649 - 37170 | 18600.8 |
| duf1343 domain-containing protein | D3M59_00190 | Not Available | + | 37167 - 38366 | 44821.6 |
| sulfotransferase | D3M59_00195 | Not Available | - | 38335 - 39522 | 45006.9 |
| vwa domain-containing protein | D3M59_00200 | Not Available | - | 39519 - 40697 | 44556.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.