Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas edaphi |
| Strain | strain DAC4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
449324 bp
Thymine Count
448770 bp
Guanine Count
736304 bp
Cytosine Count
738754 bp
Genome Length
2373152 bp
Protein-coding Genes
2311 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D3M59_00910 | Not Available | Positive | 179291 - 179620 | 11336.4 |
| carbonic anhydrase | D3M59_00915 | Not Available | Negative | 179631 - 180263 | 23320.6 |
| lipoyl synthase | D3M59_00920 | Not Available | Positive | 180347 - 181276 | 34076.1 |
| type ii toxin-antitoxin system rata family toxin | D3M59_00925 | Not Available | Positive | 181276 - 181737 | 17398.4 |
| cina family protein | D3M59_00930 | Not Available | Negative | 181698 - 182204 | 17201.4 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | D3M59_00935 | Not Available | Negative | 182201 - 183343 | 39841.7 |
| trna dihydrouridine synthase dusb | D3M59_00940 | Not Available | Positive | 183394 - 184392 | 36100.0 |
| hamp domain-containing protein | D3M59_00945 | Not Available | Positive | 184445 - 186718 | 82670.9 |
| sigma-54-dependent fis family transcriptional regulator | D3M59_00950 | Not Available | Positive | 186718 - 188097 | 50665.0 |
| rna chaperone hfq | D3M59_00955 | Not Available | Positive | 188106 - 188600 | 17899.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
