Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas edaphi |
| Strain | strain DAC4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
449324 bp
Thymine Count
448770 bp
Guanine Count
736304 bp
Cytosine Count
738754 bp
Genome Length
2373152 bp
Protein-coding Genes
2311 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase (atp-hydrolyzing) subunit b | D3M59_06555 | Not Available | Positive | 1278598 - 1281066 | 90638.5 |
| endonuclease | D3M59_06560 | Not Available | Positive | 1281035 - 1281877 | 30671.9 |
| rna polymerase sigma-54 factor | D3M59_06565 | Not Available | Negative | 1281874 - 1283334 | 52591.5 |
| lps export abc transporter atp-binding protein | D3M59_06570 | Not Available | Negative | 1283353 - 1284126 | 28374.3 |
| osta family protein | D3M59_06575 | Not Available | Negative | 1284130 - 1284660 | 18195.8 |
| lps export abc transporter periplasmic protein lptc | D3M59_06580 | Not Available | Negative | 1284666 - 1285304 | 23296.1 |
| ribonuclease d | D3M59_06585 | Not Available | Negative | 1285307 - 1285930 | 23254.7 |
| cold-shock protein | D3M59_06590 | Not Available | Positive | 1286178 - 1287014 | 27806.2 |
| gnat family n-acetyltransferase | D3M59_06595 | Not Available | Positive | 1287100 - 1287618 | 19113.0 |
| cisplatin damage response atp-dependent dna ligase | D3M59_06600 | Not Available | Negative | 1287615 - 1289213 | 59448.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
