Atopobacter sp. AH10

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Carnobacteriaceae

Genus

Atopobacter

Description

Atopobacter sp. AH10 is characterized by having a single replicon, indicating a streamlined genomic structure. The accession number for this strain is QXPZ00000000.1, which serves as a reference for its genomic data. This bacterium is classified within the genus Atopobacter, which is part of the broader microbial community. The single replicon suggests that Atopobacter sp. AH10 may exhibit specific ecological adaptations that allow it to thrive in particular environments. Biologically, the presence of a single replicon could imply a reduced complexity in its genetic regulation compared to organisms with multiple replicons, potentially leading to a more efficient replication process. Understanding the genomic characteristics of Atopobacter sp. AH10 can provide insights into its ecological role and interactions within its habitat. In summary, Atopobacter sp. AH10, with its unique genomic feature of one replicon, may be particularly suited to adapt to and thrive in its specific ecological niche, reflecting the diverse strategies bacteria employ for survival and adaptation.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyCarnobacteriaceae
GenusAtopobacter
SpeciesAtopobacter sp. AH10
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Atopobacter sp. AH10 AH10_contig_79, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1848 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
radical sam/cys-rich domain proteinD3H64_08305Not AvailablePositive1854587 - 185554035961.3
elongation factor pD3H64_08310Not AvailableNegative1856134 - 185669720625.0
translation initiation factor if-3D3H64_08315Not AvailablePositive1857026 - 185752618969.1
50s ribosomal protein l35D3H64_08320Not AvailablePositive1857546 - 18577467682.54
50s ribosomal protein l20D3H64_08325Not AvailablePositive1857780 - 185813613477.9
peptidase p60D3H64_08330Not AvailablePositive1858313 - 18584454859.79
conjugal transfer proteinD3H64_08335Not AvailablePositive1858442 - 185937735859.6
tetracycline resistance determinant leader peptideD3H64_08340Not AvailablePositive1859652 - 18597383358.19
tetracycline resistance ribosomal protection protein tet(m)D3H64_08345Not AvailablePositive1859754 - 186167372527.5
conjugal transfer proteinD3H64_08350Not AvailablePositive1861774 - 18619597288.03

Displaying genes 1631 – 1640 of 1981 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.