Atopobacter sp. AH10

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Carnobacteriaceae

Genus

Atopobacter

Description

Atopobacter sp. AH10 is characterized by having a single replicon, indicating a streamlined genomic structure. The accession number for this strain is QXPZ00000000.1, which serves as a reference for its genomic data. This bacterium is classified within the genus Atopobacter, which is part of the broader microbial community. The single replicon suggests that Atopobacter sp. AH10 may exhibit specific ecological adaptations that allow it to thrive in particular environments. Biologically, the presence of a single replicon could imply a reduced complexity in its genetic regulation compared to organisms with multiple replicons, potentially leading to a more efficient replication process. Understanding the genomic characteristics of Atopobacter sp. AH10 can provide insights into its ecological role and interactions within its habitat. In summary, Atopobacter sp. AH10, with its unique genomic feature of one replicon, may be particularly suited to adapt to and thrive in its specific ecological niche, reflecting the diverse strategies bacteria employ for survival and adaptation.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyCarnobacteriaceae
GenusAtopobacter
SpeciesAtopobacter sp. AH10
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Atopobacter sp. AH10 AH10_contig_79, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1848 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcription termination/antitermination protein nusgD3H64_07580Not AvailableNegative1699473 - 170002720820.8
preprotein translocase subunit seceD3H64_07585Not AvailableNegative1700177 - 17003476547.0
50s ribosomal protein l33D3H64_07590Not AvailableNegative1700402 - 17005545860.14
sigma-70 family rna polymerase sigma factorD3H64_07595Not AvailableNegative1700800 - 170141123842.4
nyn domain-containing proteinD3H64_07600Not AvailableNegative1701463 - 170200520830.7
23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmbD3H64_07605Not AvailableNegative1702002 - 170289232315.2
mini-ribonuclease 3D3H64_07610Not AvailableNegative1702885 - 170335817341.7
cysteine--trna ligaseD3H64_07615Not AvailableNegative1703351 - 170477854086.6
glutamate--trna ligaseD3H64_07620Not AvailableNegative1704899 - 170637155737.3
hypothetical proteinD3H64_07625Not AvailableNegative1706711 - 17069177811.03

Displaying genes 1491 – 1500 of 1981 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.