Atopobacter sp. AH10

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Carnobacteriaceae

Genus

Atopobacter

Description

Atopobacter sp. AH10 is characterized by having a single replicon, indicating a streamlined genomic structure. The accession number for this strain is QXPZ00000000.1, which serves as a reference for its genomic data. This bacterium is classified within the genus Atopobacter, which is part of the broader microbial community. The single replicon suggests that Atopobacter sp. AH10 may exhibit specific ecological adaptations that allow it to thrive in particular environments. Biologically, the presence of a single replicon could imply a reduced complexity in its genetic regulation compared to organisms with multiple replicons, potentially leading to a more efficient replication process. Understanding the genomic characteristics of Atopobacter sp. AH10 can provide insights into its ecological role and interactions within its habitat. In summary, Atopobacter sp. AH10, with its unique genomic feature of one replicon, may be particularly suited to adapt to and thrive in its specific ecological niche, reflecting the diverse strategies bacteria employ for survival and adaptation.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyCarnobacteriaceae
GenusAtopobacter
SpeciesAtopobacter sp. AH10
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Atopobacter sp. AH10 AH10_contig_79, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1848 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-specific tyrosine recombinase xerdD3H64_05405Not AvailableNegative1229073 - 122997535004.4
transcriptional repressorD3H64_05410Not AvailableNegative1229979 - 123043717837.6
dna-binding proteinD3H64_05415Not AvailableNegative1230450 - 123130132300.8
pyruvate kinaseD3H64_05420Not AvailableNegative1231427 - 123318463273.4
6-phosphofructokinaseD3H64_05425Not AvailableNegative1233294 - 123425934843.2
dna polymerase iii subunit alphaD3H64_05430Not AvailableNegative1234381 - 1237698126726.0
duf2929 family proteinD3H64_05435Not AvailablePositive1237789 - 12379837389.31
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaD3H64_05440Not AvailableNegative1238042 - 123907939063.7
holliday junction branch migration dna helicase ruvbD3H64_05445Not AvailableNegative1239093 - 124010637626.9
holliday junction branch migration protein ruvaD3H64_05450Not AvailableNegative1240117 - 124070421734.3

Displaying genes 1101 – 1110 of 1981 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.