Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain HR135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain HR135 Contig_146, whole genome shotgun
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator phop | D3O91_25940 | Not Available | Positive | 4928422 - 4929093 | 25536.7 |
| two-component system sensor histidine kinase phoq | D3O91_25945 | Not Available | Positive | 4929093 - 4930553 | 55315.9 |
| 50s ribosomal protein l16 arginine hydroxylase | D3O91_25950 | Not Available | Positive | 4930629 - 4931750 | 42567.2 |
| peptidase t | D3O91_25955 | Not Available | Negative | 4931799 - 4933025 | 44928.0 |
| hypothetical protein | D3O91_25960 | Not Available | Positive | 4933081 - 4933296 | 8408.22 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | D3O91_25965 | Not Available | Positive | 4933275 - 4934411 | 43044.8 |
| spermidine/putrescine abc transporter permease potb | D3O91_25970 | Not Available | Positive | 4934395 - 4935258 | 32398.4 |
| class i sam-dependent methyltransferase | D3O91_25980 | Not Available | Positive | 4935855 - 4936481 | 22995.6 |
| nucleocapsid protein | D3O91_25985 | Not Available | Negative | 4936426 - 4936563 | 5261.65 |
| tail fiber domain-containing protein | D3O91_25995 | Not Available | Negative | 4936719 - 4936888 | 6184.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





