Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain HR135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain HR135 Contig_146, whole genome shotgun
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yjdp | D3O91_17880 | Not Available | Negative | 3460653 - 3460982 | 13469.4 |
| ribose 5-phosphate isomerase b | D3O91_17885 | Not Available | Negative | 3461051 - 3461500 | 16074.3 |
| murr/rpir family transcriptional regulator | D3O91_17895 | Not Available | Positive | 3461859 - 3462749 | 32364.1 |
| d-allose-binding periplasmic protein | D3O91_17900 | Not Available | Positive | 3462808 - 3463743 | 32911.7 |
| d-allose abc transporter atp-binding protein alsa | D3O91_17905 | Not Available | Positive | 3463870 - 3465402 | 56764.3 |
| d-allose abc transporter permease | D3O91_17910 | Not Available | Positive | 3465381 - 3466361 | 34317.8 |
| d-allulose-6-phosphate 3-epimerase | D3O91_17915 | Not Available | Positive | 3466372 - 3467067 | 26110.7 |
| allose kinase | D3O91_17920 | Not Available | Positive | 3467051 - 3467980 | 33840.9 |
| alkyl/aryl-sulfatase | D3O91_17925 | Not Available | Positive | 3468253 - 3470238 | 73139.0 |
| hypothetical protein | D3O91_17930 | Not Available | Positive | 3470447 - 3470722 | 10257.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





