Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain HR135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain HR135 Contig_146, whole genome shotgun
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | D3O91_15180 | Not Available | Positive | 2959564 - 2960577 | 37148.7 |
| oligopeptide transport atp-binding protein oppf | D3O91_15185 | Not Available | Positive | 2960574 - 2961578 | 37183.8 |
| duf440 family protein | D3O91_15190 | Not Available | Negative | 2961631 - 2961859 | 8790.24 |
| transcriptional regulator nrdr | D3O91_15195 | Not Available | Negative | 2961860 - 2961947 | 3323.06 |
| duf3251 domain-containing protein | D3O91_15200 | Not Available | Positive | 2962098 - 2962637 | 19600.6 |
| nucleoside-specific channel-forming protein tsx | D3O91_15205 | Not Available | Positive | 2962936 - 2963820 | 33590.6 |
| hnh endonuclease | D3O91_15210 | Not Available | Negative | 2963997 - 2964344 | 13364.7 |
| protein translocase subunit secf | D3O91_15215 | Not Available | Negative | 2964472 - 2965443 | 35384.6 |
| protein translocase subunit secd | D3O91_15220 | Not Available | Negative | 2965454 - 2967301 | 66636.3 |
| preprotein translocase subunit yajc | D3O91_15225 | Not Available | Negative | 2967329 - 2967661 | 11887.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





