Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain HR135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain HR135 Contig_146, whole genome shotgun
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf423 domain-containing protein | D3O91_13560 | Not Available | Negative | 2643486 - 2643881 | 14334.0 |
| glycine cleavage system transcriptional activator | D3O91_13565 | Not Available | Negative | 2643900 - 2644817 | 34403.4 |
| ygdi/ygdr family lipoprotein | D3O91_13570 | Not Available | Negative | 2645168 - 2645395 | 8174.67 |
| cysteine desulfurase csda | D3O91_13575 | Not Available | Positive | 2645587 - 2646792 | 43236.6 |
| sulfur acceptor protein csde | D3O91_13580 | Not Available | Positive | 2646792 - 2647235 | 15941.2 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | D3O91_13585 | Not Available | Negative | 2647286 - 2648092 | 28563.6 |
| murein transglycosylase a | D3O91_13590 | Not Available | Negative | 2648331 - 2649428 | 40412.9 |
| Trna-met | Not Available | Not Available | Positive | 2649637 - 2649713 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2649747 - 2649823 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2649857 - 2649933 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





