Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain HR135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain HR135 Contig_146, whole genome shotgun
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate decarboxylase alpha | D3O91_11630 | Not Available | Negative | 2278819 - 2280219 | 52688.0 |
| cytochrome-c peroxidase | D3O91_11635 | Not Available | Negative | 2280430 - 2281827 | 51471.2 |
| alpha,alpha-trehalase tref | D3O91_11640 | Not Available | Positive | 2282232 - 2283881 | 63674.1 |
| helix-turn-helix transcriptional regulator | D3O91_11645 | Not Available | Negative | 2283932 - 2284534 | 22605.6 |
| lysr family transcriptional regulator | D3O91_11650 | Not Available | Positive | 2285054 - 2285953 | 33305.6 |
| inner membrane protein yhjd | D3O91_11655 | Not Available | Positive | 2286002 - 2287015 | 37902.6 |
| mfs transporter | D3O91_11660 | Not Available | Positive | 2287426 - 2288748 | 47210.9 |
| asma family protein | D3O91_11665 | Not Available | Negative | 2288930 - 2290990 | 74461.8 |
| cyclic di-gmp phosphodiesterase yhjh | D3O91_11670 | Not Available | Negative | 2291060 - 2291827 | 29602.9 |
| hypothetical protein | D3O91_11675 | Not Available | Positive | 2291796 - 2291975 | 6843.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





