Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain HR135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain HR135 Contig_146, whole genome shotgun
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4,5-dopa dioxygenase extradiol | D3O91_09975 | Not Available | Positive | 1946854 - 1947642 | 28877.7 |
| glutathionylspermidine synthase family protein | D3O91_09980 | Not Available | Negative | 1947680 - 1948840 | 45028.4 |
| duf1190 family protein | D3O91_09985 | Not Available | Negative | 1948846 - 1949517 | 23480.7 |
| hypothetical protein | D3O91_09990 | Not Available | Negative | 1949405 - 1949665 | 9916.83 |
| outer membrane protein tolc | D3O91_09995 | Not Available | Negative | 1949665 - 1951146 | 53743.7 |
| adp-ribose diphosphatase | D3O91_10000 | Not Available | Positive | 1951351 - 1951980 | 23641.1 |
| duf1249 family protein | D3O91_10005 | Not Available | Positive | 1951981 - 1952403 | 16549.0 |
| phosphodiesterase | D3O91_10010 | Not Available | Positive | 1952428 - 1953255 | 30939.7 |
| esterase yqia | D3O91_10015 | Not Available | Positive | 1953255 - 1953836 | 21642.7 |
| dna topoisomerase iv subunit b | D3O91_10020 | Not Available | Positive | 1953865 - 1955757 | 70231.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





