Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain HR135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain HR135 Contig_146, whole genome shotgun
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | D3O91_11905 | Not Available | Negative | 2348180 - 2348311 | 5013.16 |
| ggdef domain-containing protein | D3O91_11910 | Not Available | Negative | 2348262 - 2349209 | 34384.4 |
| duf4186 domain-containing protein | D3O91_11915 | Not Available | Negative | 2349321 - 2349680 | 13546.6 |
| glutaminase 2 | D3O91_11920 | Not Available | Negative | 2349680 - 2350606 | 33517.6 |
| succinate semialdehyde dehydrogenase | D3O91_11925 | Not Available | Negative | 2350670 - 2352058 | 49720.7 |
| lysr family transcriptional regulator | D3O91_11930 | Not Available | Positive | 2352159 - 2353040 | 32484.9 |
| sugar efflux transporter | D3O91_11940 | Not Available | Positive | 2354382 - 2355572 | 42540.8 |
| naat family transporter marc | D3O91_11945 | Not Available | Negative | 2355597 - 2356262 | 23618.7 |
| marr family transcriptional regulator | D3O91_11950 | Not Available | Positive | 2356474 - 2356908 | 16066.0 |
| mdr efflux pump acrab transcriptional activator mara | D3O91_11955 | Not Available | Positive | 2356928 - 2357311 | 15185.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





